Liste des publications


  • Mach N., Plancade S., Pacholewska A., Lecardonnel J., Rivière J., Moroldo M., Vaiman A., Morgenthaler C., Beinat M., Nevot A., Robert C., Barrey E. Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in the horse. Scientific Reports 2016 Mar 10;6:22932
  • Hoffmann T., Pham H.P., Bridonneau C., Aubry C., Lamas B., Martin-Gallausiaux C., Moroldo M., Rainteau D., Lapaque N., Six A., Richard M.L., Fargier E., Le Guern M.E., Langella P., Sokol H. Microorganisms linked to inflammatory bowel disease-associated dysbiosis differentially impact host physiology in gnotobiotic mice. ISME Journal 2016 Feb 10(2):460-77


  • Remot A., Descamps D., Jouneau L., Laubreton D., Dubuquoy C., Bouet S., Lecardonnel J., Rebours E., Petit-Camurdan A., Riffault S. Flt3 ligand improves the innate response to respiratory syncytial virus and limits lung disease upon RSV re-exposure in neonate mice. European Journal of Immunology 2015 Dec 17
  • Vu Manh T.-P., Elhmouzi-Younes J., Urien C., Ruscanu S., Jouneau L., Boudinot P., Bourge M., Moroldo M., Foucras G., Salmon H., Marty H., Quéré P., Bertho N., Dalod M., Schwartz-Cornil I. Defining mononuclear phagocyte subset homology across vertebrate species through comparative transcriptomics. Frontiers in immunology 2015 Jun 19;6:299.
  • Roux P.F., Marthey S., Djari A., Moroldo M., Esquerré D., Estellé J., Klopp C., Lagarrigue S., Demeure O. Comparison of whole genome (13X) and capture resequencing (87X) methods for SNP and genotype calling. Animal Genetics 2015 Feb;46(1):82-6.
  • Jacquier V., Estellé J., Schmaltz-Panneau B., Lecardonnel J., Moroldo M., Lemonnier G., Turner-Maier J., Duranthon V., Oswald I.P., Gidenne T., Rogel-Gaillard C. Genome-wide immunity studies in the rabbit: transcriptome variations in PBMC after in vitro stimulation by LPS or PMA-ionomycin. BMC Genomics 2015 Jan 23;16(1):26.


  • Dugat T., Loux V., Marthey S., Moroldo M., Lagrée A.-C., Boulouis H.-J., Haddad N., Maillard R. Comparative genomics of first available bovine Anaplasma phagocytophilum genome obtained with targeted sequence capture. BMC Genomics. 2014 Nov 17;15(1):973
  • Marquet F., Vu Manh T.-P., Maisonnasse P., Elhmouzi-Younes J., Urien C., Edwige Bouguyon, Jouneau L., Bourge M., Simon G., Ezquerra A., Lecardonnel J., Bonneau M., Dalod M., Schwartz-Cornil I., Bertho N. Pig skin includes dendritic cells subsets homologous to human CD1a and CD14 dendritic cells presenting different migrating behaviors and T CELL activation capacities. J Immunol. 2014 Nov 10. pii: 1303150. [Epub ahead of print]
  • Chaussé A.M., Grépinet O., Bottreau E., Robert V., Hennequet-Antier C., Lalmanach A.C., Lecardonnel J., Beaumont C., Velge P. Susceptibility to Salmonella carrier-state: a possible Th2 response in  susceptible chicks. Veterinary Immunology and Immunopathology. 2014 May 15;159(1-2):16-2
  • Saenz-de-Juano M.D., Marco-Jiménez F., Schmaltz-Panneau B., Jiménez-Trigos E., Viudes-de-Castro M.P., Peñaranda D.S., Jouneau L., Lecardonnel J., Lavara R., Naturil-Alfonso C., Duranthon V., Vicente J.S. Vitrification alters rabbit foetal placenta at transcriptomic and proteomic level. Reproduction 2014 Jun;147(6):789-801
  • Leymarie O., Embury-Hyatt C., Chevalier C., Jouneau L., Moroldo M., Da Costa B., Berhane Y., Delmas B., Weingartl H.M., Le Goffic R. PB1-F2 attenuates virulence of highly pathogenic avian H5N1 influenza virus in chickens. PLoS One. 2014;9(6):e100679
  • Desjardin C., Charles C., Benoist-Lasselin C., Rivière J., Gilles M., Chassande O., Morgenthaler C., Laloë D., Lecardonnel J., Flamant F., Legeai-Mallet L., Schibler L. Chondrocytes play a major role in the stimulation of bone growth by thyroid hormone. Endocrinology 2014 Aug;155(8):3123-35
  • Schmaltz-Panneau B., Jouneau L., Osteil P., Taponnier Y., Afanassieff M., Moroldo M., Jouneau A., Daniel N., Archilla C., Savatier P., Duranthon V. Contrasting transcriptome landscapes of rabbit pluripotent stem cells in vitro and in vivo. Animal Reproduction Science 2014 2014 Sep;149(1-2):67-79


  • LEYMARIE O., JOUVION G., HERVE P.L., CHEVALIER C., LORIN V., LECARDONNEL J., DA COSTA B., DELMAS B., ESCRIOU N., LE GOFFIC R. Kinetic Characterization of PB1-F2-Mediated Immunopathology during Highly Pathogenic Avian H5N1 Influenza Virus Infection. PLoS One. 2013;8(3):e57894.

  • RUSCANU S., JOUNEAU L., URIEN C., BOURGE M., LECARDONNEL J., MOROLDO M., LOUP B., DALOD M., ELHMOUZI-YOUNES J., BEVILACQUA C., HOPE J., VITOUR D., ZIENTARA S., MEYER G., SCHWARTZ-CORNIL I. The gene expression program in blood and lymph node dendritic cell subtypes brings new insight in bluetongue pathogenesis. Journal of Virology. 2013; Jun 19. [Epub ahead of print]

  • OSTEIL P., TAPPONNIER Y., MARKOSSIAN S., GODET M., SCHMALTZ-PANNEAU B., JOUNEAU L., CABAU C., JOLY T., BLACHERE T., GOCZA E., BERNAT A., YERLE M., ACLOQUE H., HIDOT S., BOSZE S., DURANTHON V., SAVATIER P., AFANASIEFF M. Induced pluripotent stem cells derived from rabbits exhibit some characteristics of naïve pluripotency. Biology Open. 2013 May 10;2(6):613-28

  • MACH N., GAO Y., LEMONNIER G., LECARDONNEL J., OSWALD I., ESTELLE J., ROGEL-GAILLARD C. The peripheral blood transcriptome reflects variations in immunity traits in swine: towards the identification of biomarkers. Submitted to BMC Genomics



  • DEGRELLE S.A., JAFFREZIC F., CAMPION E., LE CAO K.A., LE BOURHIS D., RICHARD C., RODDE N., FLEUROT R., EVERTS R.E., LECARDONNEL J., HEYMAN Y., VIGNON X., YANG X., TIAN X.C., LEWIN H.A., RENARD J.P., HUE I. Uncoupled embryonic and extra-embryonic tissues compromise blastocyst development after somatic cell nuclear transfer. PLoS One. 2012; 7(6):e38309
  • GAO Y., WAHLBERG P., MARTHEY S., ESQUERRE D., JAFFREZIC F., LECARDONNEL J., HUGOT K., ROGEL-GAILLARD C. Analysis of porcine MHC using microarrays. Veterinary Immunology and Immunopathology. 2012 Jul 15; 148(1-2):78-84


  • FLORI L., GAO Y., OSWALD I.P., LEFEVRE F., BOUFFAUD M., MERCAT M.J., BIDANEL J.P., ROGEL-GAILLARD C. Deciphering the genetic control of innate and adaptive immune responses in pig: a combined genetic and genomic study. BMC Proceedings 2011, Jun 3; 5 Suppl 4:S32


  • GAO Y., FLORI L., LECARDONNEL J., ESQUERRE D., HU Z.L., TELLAUD A., LEMONNIER G., LEFEVRE F., OSWALD I.P., ROGEL-GAILLARD C. Transcriptome analysis of porcine PBMCs after in vitro stimulation by LPS or PMA/ionomycin using an expression array targeting the pig immune response. BMC Genomics, 2009 Nov 20; 10:546

  • VAN DEN BROEKE A., VAN POUCKE M., MARCOS-CARCAVILLA A., HUGOT K., HAYES H., BERTAUD M., VAN ZEVEREN A., PEELMAN L.J. Characterization of the ovine ribosomal protein SA gene and its pseudogenes. BMC Genomics, 2010 Mar 16; 11:179


  • ROLLAND A.D., LAREYRE J.J., GOUPIL A.S., MONTFORT J., RICORDEL M.J., ESQUERRE D., HUGOT K., HOULGATTE R., CHELMEL F., LE GAC F. Development identifies evolutionary conserved genes involved in spermatogenesis. BMC Genomics, 2009 Nov 20; 10:546
  • VAN POUCKE M., WILLEMARCK N., HUGOT K., VAN ZEVEREN A., PEELMAN L.J. Complete genomic sequence of the goat prion protein gene (PRNP). Virus Genes, 2009 Feb; 38(1):189-92



  • DARIAS M.J., ZAMBONINO-INFANTE J.L., HUGOT K., CAHU C.L., MAZURAIS D. Gene expression patterns during the larval development of European Sea Bass (Dicentrarchus Labrax) by microarray analysis. Marine Biotechnology, 4, 416-428
  • DEGRELLE S.A., HENNEQUET-ANTIER C., CHIAPELLO H., PIOT-KAMINSKI K., PIUMI F., ROBIN S., RENARD J.P., HUE I. Amplification biases: possible differences among deviating gene expressions. BMC Genomics, 9, 46
  • FLORI L., ROGEL-GAILLARD C., COHCET M., LEMONNIER G., HUGOT K., CHARDON P., ROBIN S., LEFEVRE F. Transcriptomic analysis of the dialog between Pseudorabies virus and porcine epithelial cells during time-course infection. BMC Genomics, 9, 123
  • FLORI L., ROGEL-GAILLARD C., MARIANI V., LEMONNIER G., COCHET M., HUGOT K., CHARDON P., ROBIN S., LEFEVRE F. A combined transcriptomic approach to analyse the dialog between Pseudorabies virus and porcine cells. Developments in Biologicals, 132, 99-104
  • KOLDITZ C., PABOEUF G., BORTHAIRE M., ESQUERRE D., SAN CRISTOBAL M., LEFEVRE F., MEDALE F. Changes induced by dietary energy intake and divergent selection for muscle fat content in rainbow trout (Oncorhynchus mykiss), assessed by transcriptome and proteome analysis of the liver. BMC Genomics, 9, 506
  • LE GAC F., LAREYRE J.J., MONTFORT J., ESQUERRE D., HOULGATTE R. Transcriptional analysis of spermatogenesis regulation by sex steroids in trout. Cybium, 32 (Suppl), 119-121
  • PANSERAT S., DUCASSE-CABANOT S., PLAGNES-JUAN E., SRIVASTAVA P.P., KOLDITZ C., PIUMI F., ESQUERRE D., KAUSHIK S. Dietary fat level modifies the expression of hepatic genes in juvenile rainbow trout (Oncorhynchus mykiss) as revealed by microarray analysis. Aquaculture, 275, 235-241
  • PANSERAT S., KOLDITZ C., RICHARD N., PLAGNES-JUAN E., PIUMI F., ESQUERRE D., MEDALE F., CORRAZE G., KAUSHIK S. Hepatic gene expression profile in juvenile rainbow trout (Oncorhynchus mykiss) fed fish meal or fish oil diets. British Journal of Nutrition, 100, 953-967
  • RAMBOW F., MALEK O., GEFFROTIN C., LEPLAT J.J., BOUET S., PITON G., HUGOT K., BEVILACQUA C., HORAK V., VINCENT-NAULLEAU S. Identification of differentially expressed genes in spontaneously regressing melanoma using the MeLiM Swine Model. Pigment Cell and Melanoma Research, 21, 147-161
  • BONNET A., IANNUCCELLI E., HUGOT K., BENNE F., BONALDO M.F., SOARES M.B., HATEY F., TOSSER-KLOPP G. A pig multi-tissue normalised cDNA library: large-scale sequencing, cluster analysis and 9K micro-array resource generation. BMC Genomics Jan 14; 9:17


Le CRB GADIE travaille avec les équipes de recherche en tant que collaborateur ou prestataire de service. Selon le niveau d'implication dans les différents projets, ses membres peuvent apparaître parmi les auteurs d'une publication, ou bien ils peuvent apparaître au niveau des remerciements. Les noms des membres de la plateforme (actuels et anciens) figurant parmi les auteurs des publications sont indiqués en gras. S'il n'y a pas de noms des membres de la plateforme parmi les auteurs, cela signifie que la plateforme a été citée au niveau des remerciements.


Rédacteur: Sylvain Marthey - Dernière modification: 01 April 2016